ARDENT
1.0.3

Contents:

  • Install
    • Install the released version
    • Python package dependencies
    • Hardware requirements
    • Testing
  • Tutorial
    • Imports
    • Load data
    • Preprocess raw image
    • Downsample data
    • Preprocess downsampled image
    • Orient data
      • Visualize data orientation as loaded.
      • Reorient target and revisualize
      • Use reoriented target & target_resolution
    • Parameter tune
    • Perform registration
    • Apply registration
    • Visualize results
  • Reference
    • transform
    • io
    • visualization
    • preprocessing
      • preprocessing pipeline
      • resampling
      • normalization
    • presets
      • registration_parameters
      • batch_preprocessing
  • License

Useful Links

  • ARDENT @ GitHub
  • ARDENT @ PyPI
ARDENT
  • »
  • Index

Index

A | B | C | G | H | L | N | P | R | S | T

A

  • ardent.preprocessing.normalization (module)
  • ardent.preprocessing.resampling (module)
  • ardent.presets.batch_preprocessing (module)
  • ardent.presets.registration_parameters (module)
  • ardent.transform (module)
  • ardent.visualization (module)

B

  • basic_preprocessing() (in module ardent.presets.batch_preprocessing)
  • basic_preprocessing_with_pad() (in module ardent.presets.batch_preprocessing)

C

  • cast_to_typed_array() (in module ardent.preprocessing.normalization)
  • center_to_mean() (in module ardent.preprocessing.normalization)
  • continue_registration() (ardent.transform.Transform method)

G

  • get_lddmm_dict() (ardent.transform.Transform method)
  • get_registration_preset() (in module ardent.presets.registration_parameters)
  • get_registration_presets() (in module ardent.presets.registration_parameters)

H

  • heatslices() (in module ardent.visualization)

L

  • load() (ardent.transform.Transform method)

N

  • normalize_by_MAD() (in module ardent.preprocessing.normalization)

P

  • pad() (in module ardent.preprocessing.normalization)
  • preprocess() (in module ardent.preprocessing.__init__)

R

  • register() (ardent.transform.Transform method)

S

  • save() (ardent.transform.Transform method)

T

  • Transform (class in ardent.transform)
  • transform_image() (ardent.transform.Transform method)
  • transform_points() (ardent.transform.Transform method)

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